千穗谷GRF转录因子家族的全基因组鉴定及其对赤霉素的响应模式分析
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国家自然科学基金项目(32001408);湖南省自然科学基金项目(2024JJ5181)


Genome-wide identification and analysis of the GRF transcription factor family in Amaranthus hypochondriacus and its response to gibberellin
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    摘要:

    为明确千穗谷GRF基因在千穗谷生长发育过程中的作用,基于最新的千穗谷基因组信息,对AhGRF基因家族成员进行预测,并对其序列及其对外源赤霉素的响应模式进行分析。结果表明:千穗谷中共鉴定出AhGRF1~AhGRF9这9个基因,其不均匀地分布在8条染色体上;AhGRFs分为5个亚家族,不同的AhGRF基因的表达模式不同,绝大多数AhGRF基因在花器官中高表达。AhGRF的启动子包含能响应水杨酸、脱落酸、茉莉酸甲酯、赤霉素、生长素等激素以及干旱、低温等胁迫的响应元件。AhGRF2、AhGRF5、AhGRF6、AhGRF8的启动子还含有与胚乳表达、分生组织、栅栏叶肉细胞分化相关的作用元件。赤霉素处理显著促进了千穗谷叶片和茎的生长,除AhGRF8在叶与茎中不表达外,叶中AhGRF7、AhGRF9的表达被抑制,AhGRF1~AhGRF6的表达量均在不同时间点上调;茎中的AhGRFs的表达模式与叶中的不同,所有基因的相对表达量均在赤霉素处理1 h时上调,且多个基因表达呈现节律性。

    Abstract:

    To clarify the role of the AhGRF gene in the growth and development of Amaranthus hypochondriacus, we identified the members of its gene family utilizing the latest genomic data, followed by a comprehensive analysis of their sequences and response patterns to exogenous gibberellin. The results showed that nine genes including AhGRF1-AhGRF9 were identified and they were unevenly distributed on eight chromosomes and can be divided into five subfamilies, with different AhGRF genes exhibiting distinct expression patterns and the vast majority being highly expressed in floral organs. The promoter regions of AhGRFs contained response elements for hormones such as salicylic acid, abscisic acid, methyl jasmonate, gibberellin, and auxin, as well as stress-related elements like those induced by drought and low temperature; promoters of AhGRF2, AhGRF5, AhGRF6, AhGRF8 also carried functional elements associated with endosperm expression, meristem development and palisade mesophyll cell differentiation. Furthermore, gibberellin treatment significantly promoted leaf and stem growth. Except for AhGRF8, which was not expressed in leaves and stems, the expressions of AhGRF7 and AhGRF9 in leaves were suppressed, while the expressions of AhGRF1-AhGRF6 were upregulated at different time points. In stems, relative expressions of all genes were upregulated at 1 hour after gibberellin treatment, displaying a rhythmic expression pattern in multiple genes, which differed from their expression profile in leaves.

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杨晟,甘锦鑫,周涛,刘宁芳,卢蕊,胡龙兴,徐倩*.千穗谷GRF转录因子家族的全基因组鉴定及其对赤霉素的响应模式分析[J].湖南农业大学学报(自然科学版),2025,51(5):10-18.

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  • 在线发布日期: 2025-11-28
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