五指山猪和长白猪背最长肌蛋白组学研究
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海南省自然科学基金项目(319QN327);海南省热带动物繁育与疫病研究重点实验室开放课题(HNXMSYS201501);国家自然科学基金项目(31760646);海南省省属科研院所技术开发研究专项(KYYS–2015–02)


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    摘要:

    为比较五指山猪和长白猪生长后期肌肉生长发育的差异,以6、8月龄五指山猪和长白猪为试验对象,采用同位素标记相对和绝对定量技术(iTRAQ)对其背最长肌总蛋白进行鉴定,结合生物信息学技术筛选品种间和品种内差异蛋白,并对其进行KEGG通路富集分析。结果表明:4组样品中共鉴定到1713个蛋白;五指山猪和长白猪品种间比较,6、8月龄猪中分别有460、337个差异的蛋白;品种内2个生长阶段比较,五指山猪和长白猪中分别有421、275个差异蛋白;2种比较均为上调的差异蛋白数多于下调差异蛋白数;KEGG通路分析发现,在五指山猪和长白猪品种间,6、8月龄在2个品种间的差异蛋白富集到差异显著(P<0.05)的条目分别为34、33个,在品种内,五指山猪和长白猪在2个生长阶段间的差异蛋白富集到差异显著(P<0.05)的条目分别为24、14个;在品种内发现了调控骨骼肌分化过程中发挥着重要作用的PI3K/AKT信号通路和影响脂肪沉积的PPAR信号通路,在品种间除了这2种外,还发现有肌纤维类型发育相关的糖酵解/糖异生信号通路;品种内2个比较组在PPAR和PI3K/AKT信号通路分别有10、9个共同表达的基因,品种间2个比较组在糖酵解/糖异生、PI3K/AKT和PPAR信号通路分别有10、13、9个共同表达的基因,对这些信号通路中共同表达的基因进行分析后筛选到一些与肌肉生长发育和脂肪代谢相关的关键基因。

    Abstract:

    In order to explore the differences of muscle growth and development between Wuzhishan pigs and Landrace pigs at the later stage of growth, in this study, an isobaric tag for relative and absolute quantification(iTRAQ) based proteome were used to analyze total protein of the longissimus dorsi muscle tissues of at the age of 6 months and 8 months of the two studied pig breeds. Combined with bioinformatics methods to sort out the differential proteins KEGG pathway enrichment analysis of differential proteins were performed to characterize the difference. The results showed that a total of 1713 proteins were identified in the four collected group samples. Comparing the 6-month-old and 8-month-old Wuzhishan pigs with those of Landrace pigs, 460 and 337 different proteins were found, respectively. The comparison of the two growth stages in the breed showed that there were 421 differential proteins in Wuzhishan pigs and 275 differential proteins in Landrace pigs, and the results were the same as one of intervarietal comparison, which was the number of up-regulated differential proteins was more than the number of differential down-regulated proteins. Based on the KEGG pathway enrichment analysis, 34 and 33 items with significant difference(P<0.05) between the two growth stages of 6-month-old and 8-month-old of Wuzhishan pigs and Landrace pigs were found, respectively. While within the breed, the terms enriched were 24 and 14, respectively. The PI3K/AKT signaling pathway, which plays an important role in regulating skeletal muscle differentiation, and the PPAR signaling pathway that affect fat deposition, were found in the breeds; among breeds, the glycolysis/gluconeogenesis signaling pathway related to the development of muscle fiber types was also found. There were 10 and 9 genes co-expressed in PPAR and PI3K/AKT signaling pathways in the two groups within the breed, respectively. While 10, 13 and 9 genes co-expressed in glycolysis/gluconeogenesis, PI3K/AKT and PPAR signaling pathways between the two comparied groups, respectively. After analyzing the genes commonly expressed in these signaling pathways, some key genes linked to the muscle growth and fat metabolism were screened.

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孙瑞萍,陈婷,王峰,晁哲,刘海隆,刘圈炜,黄丽丽,邢漫萍,郑心力,魏立民.五指山猪和长白猪背最长肌蛋白组学研究[J].湖南农业大学学报:自然科学版,2021,47(5):.

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  • 在线发布日期: 2021-11-02
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