水稻gypsy类逆转座子对不同胁迫条件的响应
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国家973计划项目(2012CB722901和2100CB100403)


Response of rice gypsy retrotransposons to different stress conditions
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    摘要:

    LTR类逆转座子是水稻基因组中数量最多,分布最广的转座元件,其中Ty3-gypsy类的比重较大。根据Ty3-gypsy类逆转座子逆转录酶的保守区域,采用简并引物通过RT-PCR从5种胁迫处理后的水稻品种月亮谷的cDNA 进行了扩增,并测序获得了一批转录片段,分析不同胁迫条件诱导激活的Ty3-gypsy类逆转座子的特点。结果表明,5种胁迫处理都能诱导月亮谷中Ty3-gypsy类逆转座子的表达;对不同胁迫响应的逆转座子序列大部分同源性较高且呈交叉分布,仅有少部分具有胁迫响应的特异性,说明很多Ty3-gypsy类逆转座子能对不同胁迫进行响应。

    Abstract:

    LTR retrotransposons are the largest and most widely distributed transposable elements in rice, of which Ty3-gypsy class is more numerous. A group of transcript fragments were amplified by RT-PCR and sequenced from cDNA of rice variety Acuche which were treated with 5 different stresses, with degenerate primers based on conserved region of reverse transcriptase in Ty3-gypsy retrotransposons. The characteristics of Ty3-gypsy sequences activated in different stresses were analyzed. The results showed that all the 5 different stresses could activate Ty3-gypsy sequences; Sequences responded to different stresses were highly conserved homologs and distributed crossly, only few of them showed specificity to stress, suggesting that many Ty3-gypsy retrotransposons could response to different stresses.

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徐玲,杨静,刘林,李成云.水稻gypsy类逆转座子对不同胁迫条件的响应[J].湖南农业大学学报:自然科学版,2012,38(6):591-596.

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  • 收稿日期:2012-06-12
  • 最后修改日期:2012-09-13
  • 录用日期:2012-11-15
  • 在线发布日期: 2012-11-30
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